Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947370.1_cds_XP_016489129.1_79685
CDS Infomation

[gene=LOC107809051] [db_xref=GeneID:107809051] [protein=calreticulin-3-like] [protein_id=XP_016489129.1] [location=join(5945..6089,6792..6899,7638..7830,8655..8913,9174..9230,9326..9373,9869..9955,10050..10107,10221..10288,10396..10488,10577..10633,10711..10773,11312..11344,11638..11649)] [gbkey=CDS]
Sequence

ATGGGGCAAATGGCTCTGTCCAAGCATGACCAAAGAACAAGTCTAACATTAGTCTTCTCA
GTTGAATCATTTCTACTAGTTTTATTACTCTTCTCGCTTGTCACCTCTTCATTCTCTGAG
ATCTTTTTCGAAGAACAGTTTGATGTTGATTGGAAGAGCAGATGGGTGAAGTCTGACTGG
AAAAGGAGTGAAGGGAAAGCAGGTTCATTTAAGCATACAGCTGGAAAATGGGCTGGTGAT
CCTGATGATAAAGGTATTCAGACATCAAGCGATGCCAAACATTTCGCCATTTCTGCTAAG
GTACCAGAATTTAGCAACAAGAACAGAACTTTGGTTGTACAATATTCTATAAAGTTTGAG
CAAGACATTGAGTGTGGTGGAGGTTACATAAAGCTTCTCTCTGGATATGTCAACCAGAAG
AAATTCGGGGGAGACACCCCTTACAGTATGATGTTTGGACCGGATATCTGTGGTACACAG
ACAAAGAAACTTCATGTTATACTTTCCTACCAAGGCCAGAATTATCCCATCAAAAAGGAT
CTACAATGTGAAACAGACAAATTAACCCATTTCTACACATTCATTCTTAGACCTGATGCA
TCATACAGCATCTGGATTGATGGTCGAGAAAGGGATTCTGGAAGCATGTATACGGACTGG
GATATCCTTCCTCCTCGGAAAATTAAAGATGTAAATGCAAAAAAGCCTGCAGATTGGGAT
GATAGAGAATATATAGAGGACCCAAACGAGGTCAAACCAGAGGGATATGACTCTATTCCA
AGAGAGACTCCTGACCCAAAAGCTAAAAAGCCTGATCACTGGGATGATGAAGAGGACGGT
ATCTGGAGACCACCAAAAATACCTAATCCAGCGTATAAGGGTCCATGGAAACGAAAGAAA
ATAAAGAACCCTAATTATAAAGGTAAATGGAGGACTCCTTGGATTGATAATCCAGAATTT
GAAGATGATCCTGACCTCTATGTGCTGAAGCCTATCAAATATGTTGGGATCGAAGTTTGG
CAGGTGAAGGCAGGTTCTATTTTTGACAACATACTGATATGCGATGAGCCAGATTATGCA
AAGAAAGTGATTGAGGAAGTCTTTGCTAATAGGGAGGCTGAAAAGGAGGCTTTTGAGGAA
GCAGAGAAAGTGAGAAAAGCAAAAGAGGAAGAGGAAGCCCGAACAGCAAGAGAGGAAGGT
GAAAGGAGGAGAAGAGAAAGGGATAGAAACAAGAGGCGCTATCGCCGTGATTACTATGAT
GACTATCATGATGAACTTTGA

Peptide Sequence

PEP ID

XP_016489129.1
PEP Infomation

PREDICTED: calreticulin-3-like [Nicotiana tabacum]
Sequence

MGQMALSKHDQRTSLTLVFSVESFLLVLLLFSLVTSSFSEIFFEEQFDVDWKSRWVKSDW
KRSEGKAGSFKHTAGKWAGDPDDKGIQTSSDAKHFAISAKVPEFSNKNRTLVVQYSIKFE
QDIECGGGYIKLLSGYVNQKKFGGDTPYSMMFGPDICGTQTKKLHVILSYQGQNYPIKKD
LQCETDKLTHFYTFILRPDASYSIWIDGRERDSGSMYTDWDILPPRKIKDVNAKKPADWD
DREYIEDPNEVKPEGYDSIPRETPDPKAKKPDHWDDEEDGIWRPPKIPNPAYKGPWKRKK
IKNPNYKGKWRTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIFDNILICDEPDYA
KKVIEEVFANREAEKEAFEEAEKVRKAKEEEEARTAREEGERRRRERDRNKRRYRRDYYD
DYHDEL

Transcript Sequence

Gene sequence data has not been registered.